Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937137.1_cds_XP_016482495.1_73716
CDS Infomation

[gene=LOC107803319] [db_xref=GeneID:107803319] [protein=1-aminocyclopropane-1-carboxylate oxidase homolog 1-like] [protein_id=XP_016482495.1] [location=complement(join(17860..18111,18390..18711,19264..19787))] [gbkey=CDS]
Sequence

ATGGTAGTTGTCACATGTGAAAATAGTTATGACAGGACAAGTGAATTAATAGTTTTTGAT
AGTACAAAAGCTGGTGTTAAAGGGCTAGTTGATGCAGGAGTTACAAGAGTCCCAAGAATT
TTCTATACAGCAGAAGATGCATATACTGAGGCATCTAATGATCCTGAAAAATCTCAAATC
AATATTCCTGTTATAGACTTAGATGGCATCAGTAAAGATCCAATCAAACGTAGCGCGATA
GTTGAAAAAATCCGTGATGCATCTGAAGTGTGGGGTTTCTTTCAAGTGGTCAATCATGGA
ATTCCAGAAAGTGTTTTGGAAGAAATGTTGAACGGTGTGAGGAGGTTTTATGAGCAAGAC
ACTGAGGTGAAGAAACAATGGTATACGCGGGATAACTCGAAAAGAGTGGTGTATAATAGC
AATTTTGATCTGTTTGGAGCTGCATCAGCTAATTGGAGGGATACTACTTACTGCAGTATG
TCTCCAAATCCTCCTACTGCTGATGAATTGCCAGAGGCTTGCAGGGATATTCTGATTGAG
TACTCGGAGCACATAAAGAAGCTAGGTTGTTCTTTATTCGAATTACTCTCTGAGGCGCTT
GGCCTCAACCCGAGCTATCTGAATGACATTGGTTGTTCAGAAGGGCTGGCTGTTTTGTAC
CATTATTACCCAGCTTGCCCTGAGCCAGAACTAACACTTGGAACTAGCAAGCATTCAGAT
AGTGACTTCTTCACAGTGCTGCTACAAGATAATAGTGGAGGTCTTCAGGTTCTTCATGAC
AATTATTGGGTTGATGTTCATCCTCTCTCTGGAGCTCTTGTAGTAAATTTTGGTGAACTT
TTACAACTCATATCAAATGACAAGTTCAAGAGCATTGCACACAGAGTACTAGCAAGTCGG
GTTGGTCCAAGAGTATCAGTAGCCTGTTTCTTTACCACCGGTCACTCGTTGTCATCAAGA
GTTTATGGACCAATTAAGGAGTTGTTATCAGAAGATAATCCCGCGAGGTATAGGGAAACT
ACGGTGAAGGATTTCTCAGTTCACTATAATGCAACAGGGCTTGGAGGCAAATCTTCCTTA
CTAGACTTTATGATCTGA

Peptide Sequence

PEP ID

XP_016482495.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Nicotiana tabacum]
Sequence

MVVVTCENSYDRTSELIVFDSTKAGVKGLVDAGVTRVPRIFYTAEDAYTEASNDPEKSQI
NIPVIDLDGISKDPIKRSAIVEKIRDASEVWGFFQVVNHGIPESVLEEMLNGVRRFYEQD
TEVKKQWYTRDNSKRVVYNSNFDLFGAASANWRDTTYCSMSPNPPTADELPEACRDILIE
YSEHIKKLGCSLFELLSEALGLNPSYLNDIGCSEGLAVLYHYYPACPEPELTLGTSKHSD
SDFFTVLLQDNSGGLQVLHDNYWVDVHPLSGALVVNFGELLQLISNDKFKSIAHRVLASR
VGPRVSVACFFTTGHSLSSRVYGPIKELLSEDNPARYRETTVKDFSVHYNATGLGGKSSL
LDFMI

Transcript Sequence

Gene sequence data has not been registered.